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Publications outcomes for 2018.

Previous annual publications lists are to the right. Please note this is a best effort. Some omissions might occur. If you see an error, let us know.


  1. Annasawmy, P., Ternon, J.F., Marsac, F., Cherel, Y., Béhagle, N., Roudaut, G., Lebourges-Dhaussy, A., Demarcq, H., Moloney, C.L., Jaquemet, S. and Ménard, F., 2018. Micronekton diel migration, community composition and trophic position in two biogeochemical provinces of the South West Indian Ocean: Insight from acoustics and stable isotopes. Deep Sea Research Part I: Oceanographic Research Papers.
  2. Aswani, S., Howard, J.A.E., Gasalla, M.A., Jennings, S., Malherbe, W., Martins, I.M., Salim, S.S., Van Putten, I.E., Swathilekshmi, P.S., Narayanakumar, R. and Watmough, G.R., 2018. An integrated framework for assessing coastal community vulnerability across cultures, oceans and scales. Climate and Development, pp.1-18. LINK HERE.
  3. Augé, A.A., Dias, M.P., Lascelles, B., Baylis, A.M.M., Black, A., Boersma, P.D., Catry, P., Crofts, S. et al., 2018. Framework for mapping key areas for marine megafauna to inform Marine Spatial Planning: The Falkland Islands case study. Marine Policy. 92:61-72. LINK HERE.
  4. Aulicino, G., Cotroneo, Y., Ansorge, I., Van, D.B., Cesarano, C., Rivas, M.B. & Casal, E.O. 2018. Sea surface salinity and temperature in the southern atlantic ocean from south African icebreakers, 2010-2017. Earth System Science Data. 10(3):1227-1236. LINK HERE.
  5. Ball, R.E., Serra-Pereira, B., Ellis, J., Genner, M.J., Iglésias, S., Johnson, A.F., Jones, C.S., Leslie, R. et al. 2018. Correction to: Resolving taxonomic uncertainty in vulnerable elasmobranchs: are the Madeira skate (Raja maderensis) and the thornback ray (Raja clavata) distinct species? (Conservation Genetics, (2016), 17, 3, (565-576), 10.1007/s10592-015-0806-1). Conservation Genetics. LINK HERE
  6. Bernardes Batista, M., Batista Anderson, A., Franzan Sanches, P., Simionatto Polito, P., Lima Silveira, T.C., Velez-Rubio, G.M., Scarabino, F., Camacho, O., Schmitz, C., Martinez, A. and Ortega, L., 2018. Kelps’ Long-Distance Dispersal: Role of Ecological/Oceanographic Processes and Implications to Marine Forest Conservation. Diversity10(1), p.11. LINK HERE.
  7. Bird, C.S., Veríssimo, A., Magozzi, S., Abrantes, K.G., Aguilar, A., Al-Reasi, H., Barnett, A., Bethea, D.M. et al. 2018. A global perspective on the trophic geography of sharks. Nature Ecology and Evolution. 2(2):299-305. LINK HERE.
  8. Boyd, P.W., Collins, S., Dupont, S., Fabricius, K., Gattuso, J.-., Havenhand, J., Hutchins, D.A., Riebesell, U. et al. 2018. Experimental strategies to assess the biological ramifications of multiple drivers of global ocean change—A review. Global Change Biology. 24(6):2239-2261. LINK HERE.
  9. Bretagnon, M., Paulmier, A., Garcon, V., Dewitte, B., Illig, S., Leblond, N., Coppola, L., Campos, F., Velazco10, F., Panagiotopoulos11, C. and Oschlies12, A., Modulation of the vertical particles transfer efficiency in the Oxygen Minimum Zone off Peru. LINK HERE.
  10. Contreras, T., Olivar, M.P., Hulley, P.A. and Fernández de Puelles, M.L., 2018. Feeding ecology of early life stages of mesopelagic fishes in the equatorial and tropical Atlantic. ICES Journal of Marine Science. LINK HERE.
  11. Crawshaw, J.A., Schallenberg, M. and Savage, C., 2018. Physical and biological drivers of sediment oxygenation and denitrification in a New Zealand intermittently closed and open lake lagoon. New Zealand Journal of Marine and Freshwater Research, pp.1-27. LINK HERE.
  12. Dornelas, M., Antão, L.H., Moyes, F., Bates, A.E., Magurran, A.E., Adam, D., Akhmetzhanova, A.A., Appeltans, W. et al. 2018. BioTIME: A database of biodiversity time series for the Anthropocene. Global Ecology and Biogeography. 27(7):760-786. LINK HERE.
  13. Douglas, E.J., Pilditch, C.A., Lohrer, A.M., Savage, C., Schipper, L.A. and Thrush, S.F., 2018. Sedimentary Environment Influences Ecosystem Response to Nutrient Enrichment. Estuaries and Coasts, pp.1-15. LINK HERE.
  14. Ekau, W., Auel, H., Hagen, W., Koppelmann, R., Wasmund, N., Bohata, K., Buchholz, F., Geist, S., Martin, B., Schukat, A. and Verheye, H.M., 2018. Pelagic key species and mechanisms driving energy flows in the northern Benguela upwelling ecosystem and their feedback into biogeochemical cycles. Journal of Marine Systems. LINK HERE.
  15. Fransner, F., Gustafsson, E., Tedesco, L., Vichi, M., Hordoir, R., Roquet, F., Spilling, K., Kuznetsov, I., Eilola, K., Mörth, C.M. and Humborg, C., 2018. Non‐Redfieldian Dynamics Explain Seasonal pCO2 Drawdown in the Gulf of Bothnia. Journal of Geophysical Research: Oceans123(1), pp.166-188. LINK HERE.
  16. Fu, C., Travers-Trolet, M., Velez, L., Grüss, A., Bundy, A., Shannon, L.J., Fulton, E.A., Akoglu, E., Houle, J.E., Coll, M. and Verley, P., 2018. Risky business: The combined effects of fishing and changes in primary productivity on fish communities. Ecological Modelling, 368, pp.265-276. LINK HERE.
  17. Gouws, G., Gon, O.F.E.R. and Leslie, R.W., 2018. The taxonomic status of the South African straptail, Macruronus capensis Davies, 1950 (Pisces, Gadiformes, Macruronidae).
  18. Greenan, T.M., Griffiths, C.L. & Santamaria, C.A. 2018. Molecular approaches uncover cryptic diversity in intertidal Ligia isopods (Crustacea, Isopoda, Ligiidae) across the southern Africa coastline. PeerJ. 2018(4). LINK HERE.
  19. Griffiths, C. and Landschoff, J., 2018. Unique ‘spring-loaded’gnathopod in the recently re-discovered and highly range-restricted estuarine amphipod Quadrivisio aviceps. African Journal of Marine Science40(2), pp.219-224.
  20. Griffith, D.J., Bone, E.L., Thomalla, S.J. and Bernard, S., 2018. Calibration of an in-water multi-excitation fluorometer for the measurement of phytoplankton chlorophyll-a fluorescence quantum yield. Optics Express26(15), pp.18863-18877. LINK HERE.
  21. Hague, M. & Vichi, M. 2018. A Link Between CMIP5 Phytoplankton Phenology and Sea Ice in the Atlantic Southern Ocean. Geophysical Research Letters. 45(13):6566-6575. LINK HERE.
  22. Hampton, S.L., Moloney, C.L., van, d.L. & Labonne, M. 2018. Spatial and temporal variability in otolith elemental signatures of juvenile sardine off South Africa. Journal of Marine Systems. (188), pp 109-116. LINK HERE.
  23. Illig, S., Cadier, E., Bachèlery, M.L. and Kersalé, M., 2018. Subseasonal Coastal Trapped Wave Propagations in the Southeastern Pacific and Atlantic Oceans: 1. A New Approach to Estimate Wave Amplitude. Journal of Geophysical Research: Oceans. LINK HERE.
  24. Jarre, A., Shannon, L.J., Cooper, R., Duggan, G.L., Gammage, L.C., Lockerbie, E.M., McGregor, E.S., Ragaller, S.M., Visser, N., Ward, C. and Watermeyer, K.E., 2018. Untangling a Gordian knot that must not be cut: Social-ecological systems research for management of southern Benguela fisheries. Journal of Marine Systems. LINK HERE.
  25. Kathena, J.N., Yemane, D., Bahamon, N. & Jansen, T. 2018. Population abundance and seasonal migration patterns indicated by commercial catch-per-unit-effort of hakes (Merluccius capensis and M. paradoxus) in the northern Benguela Current Large Marine Ecosystem. African Journal of Marine Science. 40(2):197-209.
  26. Keogan, K., Daunt, F., Wanless, S., Phillips, R.A., Walling, C.A., Agnew, P., Ainley, D.G., Anker-Nilssen, T. et al. 2018. Global phenological insensitivity to shifting ocean temperatures among seabirds. Nature Climate Change. 8(4):313-317.
  27. Kock, A.A., Photopoulou, T., Durbach, I., Mauff, K., Meÿer, M., Kotze, D., Griffiths, C.L. & O'Riain, M.J. 2018. Summer at the beach: Spatio-temporal patterns of white shark occurrence along the inshore areas of False Bay, South Africa. Movement Ecology. 6(1).
  28. Krug, M., Schilperoort, D., Collard, F., Hansen, M.W. & Rouault, M. 2018. Signature of the Agulhas Current in high resolution satellite derived wind fields. Remote Sensing of Environment. 217:340-351.
  29. Krug, C.B., Schaepman, M.E., Shannon, L.J., Cavender-Bares, J., Cheung, W., McIntyre, P.B., Metzger, J.P., Niinemets, Ü., Obura, D.O., Schmid, B. and Strassburg, B.B., 2017. Observations, Indicators and Scenarios of Biodiversity and Ecosystem Services change—a framework to support policy and decision-making. Current Opinion in Environmental Sustainability29, pp.198-206.
  30. Krüger, L., Ramos, J.A., Xavier, J.C., Grémillet, D., González-Solís, J., Petry, M.V., Phillips, R.A., Wanless, R.M. et al. 2018. Projected distributions of Southern Ocean albatrosses, petrels and fisheries as a consequence of climatic change. Ecography. 41(1):195-208.
  31. Lamont, T., Brewin, R.J.W. and Barlow, R.G., 2018. Seasonal variation in remotely-sensed phytoplankton size structure around southern Africa. Remote Sensing of Environment204, pp.617-631.
  32. Landschoff, J. and Rahayu, D.L., 2018. A new species of the hermit crab genus Diogenes (Crustacea: Decapoda: Diogenidae) from the coast of KwaZulu-Natal, South Africa. Zootaxa4379(2), p.268.
  33. Landschoff, J., Du Plessis, A. and Griffiths, C.L., 2018. A micro X-ray computed tomography dataset of South African hermit crabs (Crustacea: Decapoda: Anomura: Paguroidea) containing scans of two rare specimens and three recently described species. GigaScience7(4), p.giy022. LINK HERE.
  34. de Lecea, A.M., Coppin, R., Noyon, M. and Huggett, J.A., 2018. Zooplankton adrift: investigating transportation by cyclonic eddy. Marine Biology Research14(5), pp.436-447. LINK HERE.
  35. Leslie, R.W., Gon, O. and Gouws, G., 2018. The taxonomic status of the South African straptail, Macruronus capensis Davies, 1950 (Pisces, Gadiformes, Macruronidae). Zootaxa, 4374(1), pp.91-98.
  36. Lin, S.M., Tseng, L.C., Ang, P.O., Bolton, J. and Liu, L.C., 2018. Long-term study on seasonal changes in floristic composition and structure of marine macroalgal communities along the coast of Northern Taiwan, southern East China Sea. Marine Biology165(5), p.83. LINK HERE.
  37. Lamont, T., Barlow, R.G. & Brewin, R.J.W. 2018. Variations in remotely-sensed phytoplankton size structure of a cyclonic eddy in the southwest Indian Ocean. Remote Sensing. 10(7).
  38. Lehman, J. 2018. From ships to robots: The social relations of sensing the world ocean. Social Studies of Science. 48(1):57-79.
  39. Leliaert, F., Payo, D.A., Gurgel, C.F.D., Schils, T., Draisma, S.G.A., Saunders, G.W., Kamiya, M., Sherwood, A.R. et al. 2018. Patterns and drivers of species diversity in the Indo-Pacific red seaweed Portieria. Journal of Biogeography.
  40. Little, H.J., Vichi, M., Thomalla, S.J. and Swart, S., 2018. Spatial and temporal scales of chlorophyll variability using high-resolution glider data. Journal of Marine Systems. LINK HERE.
  41. Lockerbie, E.M., Lynam, C.P., Shannon, L.J. & Jarre, A. 2018. Applying a decision tree framework in support of an ecosystem approach to fisheries: IndiSeas indicators in the North Sea. ICES Journal of Marine Science. 75(3):1009-1020.
  42. Lopes, D.C., Martin, R.O., Henriques, M., Monteiro, H., Regalla, A., Tchantchalam, Q., Indjai, B., Cardoso, S. et al. 2018. Nest-site characteristics and aspects of the breeding biology of the endangered Timneh Parrot Psittacus timneh in Guinea-Bissau. Ostrich. 89(1):33-40.
  43. Lopes, D.C., Martin, R.O., Indjai, B., Monteiro, H., Henriques, M., Regalla, A. & Catry, P. 2018. Food diversity of Timneh Parrots (Psittacus timneh) in the Bijagós archipelago, Guinea-Bissau. African Journal of Ecology.
  44. Maggi, E., Puccinelli, E. & Benedetti-Cecchi, L. 2018. Ecological feedback mechanisms and variable disturbance regimes: the uncertain future of Mediterranean macroalgal forests. Marine Environmental Research.
  45. Makhado, A.B., Crawford, R.J.M., Dias, M.P., Dyer, B.M., Lamont, T., Pistorius, P., Ryan, P.G., Upfold, L., Weimerskirch, H. and Reisinger, R.R., 2018. Foraging behaviour and habitat use by Indian Yellow-nosed Albatrosses (Thalassarche carteri breeding at Prince Edward Island). Emu-Austral Ornithology, pp.1-10. LINK HERE.
  46. Malauene, B.S., Moloney, C.L., Lett, C., Roberts, M.J., Marsac, F. & Penven, P. 2018. Impact of offshore eddies on shelf circulation and river plumes of the Sofala Bank, Mozambique Channel. Journal of Marine Systems. 185:1-12.
  47. McKeown, D.A., Schroeder, J.L., Stevens, K., Peters, A.F., Sáez, C.A., Park, J., Rothman, M.D., Bolton, J.J. et al. 2018. Phaeoviral infections are present in Macrocystis, Ecklonia and Undaria (Laminariales) and are influenced by wave exposure in ectocarpales. Viruses. 10(8).
  48. Meinen, C.S., Speich, S., Piola, A.R., Ansorge, I., Campos, E., Kersalé, M., Terre, T., Chidichimo, M.P., Lamont, T., Sato, O.T. and Perez, R.C., 2018. Meridional Overturning Circulation Transport Variability at 34.5° S During 2009–2017: Baroclinic and Barotropic Flows and the Dueling Influence of the Boundaries. Geophysical Research Letters45(9), pp.4180-4188. LINK HERE.
  49. Mertens, K.N., Carbonell-Moore, M.C., Pospelova, V., Head, M.J., Highfield, A., Schroeder, D., Gu, H., Andree, K.B., Fernandez, M., Yamaguchi, A. and Takano, Y., 2018. Pentaplacodinium saltonense gen. et sp. nov.(Dinophyceae) and its relationship to the cyst-defined genus Operculodinium and yessotoxin-producing Protoceratium reticulatumHarmful Algae71, pp.57-77. LINK HERE.
  50. Miloslavich, P., Bax, N.J., Simmons, S.E., Klein, E., Appeltans, W., Aburto‐Oropeza, O., Andersen Garcia, M., Batten, S.D., Benedetti‐Cecchi, L., Checkley Jr, D.M. and Chiba, S., 2018. Essential ocean variables for global sustained observations of biodiversity and ecosystem changes. Global change biology24(6), pp.2416-2433. LINK HERE.
  51. Mongwe, P. N., Vichi, M. & Monteiro, P.M.S. 2018. The seasonal cycle of pCO2 and CO2 fluxes in the Southern Ocean: Diagnosing anomalies in CMIP5 Earth system models. Biogeosciences. 15(9):2851-2872. 
  52. Moyo, R., Pillay, D. and Wright, A., 2018. Density-versus trait-mediated responses of a symbiont (Betaeus jucundus) to burrows of a burrowing crustacean (Callichirus kraussi). Estuarine, Coastal and Shelf Science. 30. pp. 183-190. LINK HERE.
  53. Nkwinkwa Njouodo, A.S., Koseki, S., Keenlyside, N. and Rouault, M., 2018. Atmospheric signature of the Agulhas Current. Geophysical Research Letters. 45(10):5185-5193. LINK HERE.
  54. Novoa, A., Shackleton, R., Canavan, S., Cybele, C., Davies, S.J., Dehnen-Schmutz, K., Fried, J., Gaertner, M., Geerts, S., Griffiths, C.L. and Kaplan, H., 2018. A framework for engaging stakeholders on the management of alien species. Journal of Environmental Management, 205, pp.286-297.
  55. Newton, A., Brito, A.C., Icely, J.D., Derolez, V., Clara, I., Angus, S., Schernewski, G., Inácio, M. et al. 2018. Assessing, quantifying and valuing the ecosystem services of coastal lagoons. Journal for Nature Conservation. 44:50-65.
  56. Olivar, M.P., Bode, A., López-Pérez, C., Hulley, P.A. and Hernández-León, S., 2018. Trophic position of lanternfishes (Pisces: Myctophidae) of the tropical and equatorial Atlantic estimated using stable isotopes. ICES Journal of Marine Science. LINK HERE.
  57. Olivar, M.P., Contreras, T., Hulley, P.A., Emelianov, M., López-Pérez, C., Tuset, V. and Castellón, A., 2018. Variation in the diel vertical distributions of larvae and transforming stages of oceanic fishes across the tropical and equatorial Atlantic. Progress in Oceanography, 160, pp.83-100. LINK HERE.
  58. Ortega-Cisneros, K., Shannon, L., Cochrane, K., Fulton, E.A. & Shin, Y.-. 2018. Evaluating the specificity of ecosystem indicators to fishing in a changing environment: A model comparison study for the southern Benguela ecosystem. Ecological Indicators. 95:85-98.
  59. Paterson, B., Neis, B. & Stephenson, R.L. 2018. A social-ecological study of stock structure and fleet dynamics in the Newfoundland herring fishery. ICES Journal of Marine Science. 75(1):257-269.
  60. Payo-Payo, A., Sanz-Aguilar, A., Gaglio, D., Sherley, R.B., Cook, T.R., Altwegg, R. and Ryan, P.G., 2018. Survival estimates for the greater crested tern Thalasseus bergii in southern Africa. African Journal of Marine Science40(1), pp.43-50. LINK HERE.
  61. Phoma, S., Vikram, S., Jansson, J.K., Ansorge, I.J., Cowan, D.A., Van de Peer, Y. and Makhalanyane, T.P., 2018. Agulhas Current properties shape microbial community diversity and potential functionality. Scientific reports8(1), p.10542.
  62. Ramanantsoa, J.D., Penven, P., Krug, M., Gula, J. and Rouault, M., 2018. Uncovering a New Current: The Southwest Madagascar Coastal Current. Geophysical Research Letters45(4), pp.1930-1938. LINK HERE.
  63. Reisinger, R.R., Raymond, B., Hindell, M.A., Bester, M.N., Crawford, R.J.M., Davies, D., de Bruyn, P. J. N., Dilley, B.J. et al. 2018. Habitat modelling of tracking data from multiple marine predators identifies important areas in the Southern Indian Ocean. Diversity and Distributions. 24(4):535-550.
  64. Robertson, B.P. and Savage, C., 2018. Mud-entrained macroalgae utilise porewater and overlying water column nutrients to grow in a eutrophic intertidal estuary. Biogeochemistry, pp.1-16. LINK HERE.
  65. Robinson, G., MacTavish, T., Savage, C., Caldwell, G.S., Jones, C.L., Probyn, T., Eyre, B.D. and Stead, S.M., 2018. Carbon amendment stimulates benthic nitrogen cycling during the bioremediation of particulate aquaculture waste. Biogeosciences15(6), pp.1863-1878. LINK HERE.
  66. Ryan, P.G., Perold, V., Osborne, A. & Moloney, C.L. 2018. Consistent patterns of debris on South African beaches indicate that industrial pellets and other mesoplastic items mostly derive from local sources. Environmental Pollution. 238:1008-1016.
  67. Ryan-Keogh, T., Thomalla, S.J., Mtshali, T.N., Van Horsten, N.R. & Little, H.J. 2018. Seasonal development of iron limitation in the sub-Antarctic zone. Biogeosciences. 15(14):4647-4660.
  68. Sadchatheeswaran, S., Branch, G.M., Moloney, C.L. and Robinson, T.B., 2018. Impacts of alien ‘ecosystem engineers’ overwhelm interannual and seasonal shifts in rocky-shore community composition on Marcus Island, South Africa. African Journal of Marine Science40(2), pp.137-147. LINK HERE.
  69. Shannon, L. and Coll, M., 2017. Assessing the changing biodiversity of exploited marine ecosystems. Current Opinion in Environmental Sustainability29, pp.89-97.
  70. Shannon, L. & Moloney, C. 2018. Introduction to the special issue: Benguela: opportunity, challenge and change. Journal of Marine Systems. 188. pp 1-182. LINK HERE.
  71. Sherley, R.B., Barham, B.J., Barham, P.J., Campbell, K.J., Crawford, R.J.M., Grigg, J., Horswill, C., McInnes, A. et al. 2018. Bayesian inference reveals positive but subtle effects of experimental fishery closures on marine predator demographics. Proceedings of the Royal Society B: Biological Sciences. 285(1871). 
  72. Shin, Y.J., Houle, J.E., Akoglu, E., Blanchard, J.L., Bundy, A., Coll, M., Demarcq, H., Fu, C., Fulton, E.A., Heymans, J.J. and Salihoglu, B., 2018. The specificity of marine ecological indicators to fishing in the face of environmental change: A multi-model evaluation. Ecological Indicators89, pp.317-326. LINK HERE.
  73. Teske, P.R., Golla, T.R., Sandoval-Castillo, J., Emami-Khoyi, A., van der Lingen, C.D., von der Heyden, S., Chiazzari, B., van Vuuren, B.J. and Beheregaray, L.B., 2018. Mitochondrial DNA is unsuitable to test for isolation by distance. Scientific reports8(1), p.8448. LINK HERE.
  74. Tittensor, D., Coll, M. and Walker, N.D., 2018. A protocol for the intercomparison of marine fishery and ecosystem models: Fish-MIP v1. 0. Geosci. Model Dev., 11, 1421-1442. LINK HERE.
  75. Treasure, A.M., Roquet, F., Ansorge, I.J., Bester, M.N., Boehme, L., Bornemann, H., Charrassin, J.B., Chevallier, D., Costa, D.P., Fedak, M.A. and Guinet, C., Marine Mammals Exploring the Oceans Pole to Pole. Oceanography30(2), p.132.
  76. Tuset, V.M., Olivar, M.P., Otero-Ferrer, J., López-Pérez, C., Hulley, P.A. & Lombarte, A. 2018. Morphofunctional diversity in Diaphus spp. (Pisces: Myctophidae) from the central Atlantic Ocean: Ecological and evolutionary implications. Deep-Sea Research Part I: Oceanographic Research Papers. 138:46-59.
  77. Van, D.S., Rykaczewski, R.R., Turley, B.D., Sydeman, W.J., García-Reyes, M., Bograd, S.J., Van, D.L., Coetzee, J.C. et al. 2018. Non-stationary responses in anchovy (Engraulis encrasicolus) recruitment to coastal upwelling in the Southern Benguela. Marine Ecology Progress Series. 596:155-164
  78. Watermeyer, K.E., Jarre, A., Shannon, L.J., Mulumba, P. and Botha, J., 2018. A frame-based modelling approach to understanding changes in the distribution and abundance of sardine and anchovy in the southern Benguela. Ecological Modelling371, pp.1-17. LINK HERE.
  79. Wittmann, K.J. and Griffiths, C.L., 2018. A new species of Mysidopsis GO Sars, 1864 from the Atlantic coast of South Africa, with supplementary descriptions of two additional species and notes on colour and feeding apparatus (Mysida: Mysidae). Journal of Crustacean Biology38(2), pp.215-234. LINK HERE.